Pre-deployment steps

Setup Github Environment

The workflows are using Github environment to source its environment variables. Follow this guide to define it in your github repository and provide it as an input for the workflows.

GitHub Actions workflows (CI/CD)

Deployment is done using the /.github/workflows/deploy_tre.yml workflow. This method is also used to deploy the dev/test environment for the original Azure TRE repository.

Setup instructions

Before you can run the deploy_tre.yml workflow there are some one-time configuration steps that we need to do, similar to the Pre-deployment steps for manual deployment.

Create a service principal for the subscription so that the workflow can provision Azure resources.
Decide on a TRE ID and the location for the Azure resources
Create a Teams WebHook for deployment notifications
Configure repository secrets
Deploy the TRE using the workflow

Create a service principal for provisioning resources

Login to Azure

Log in to Azure using az login and select the Azure subscription you wish to deploy Azure TRE to:
```
az login
az account list
az account set --subscription <subscription ID>
```
See Sign in with Azure CLI for more details.
Create a service principal

A service principal needs to be created to authorize CI/CD workflows to provision resources for the TRE workspaces and workspace services.

Create a main service principal with "Owner" role:
```
az ad sp create-for-rbac --name "sp-aztre-cicd" --role Owner --scopes /subscriptions/<subscription_id> --sdk-auth
```
Caution

Save the JSON output locally - as you will need it later for setting secrets in the build
Create a secret in your github environment named AZURE_CREDENTIALS and use the JSON output from the previous step as its value. Note it should look similar to this:
```
{
  "clientId": "",
  "clientSecret": "",
  "subscriptionId": "",
  "tenantId": ""
}
```

Configure Core Secrets

Configure the following secrets in your github environment:

Secret name	Description
`TRE_ID`	A globally unique identifier. `TRE_ID` can be found in the resource names of the Azure TRE instance; for example, a `TRE_ID` of `tre-dev-42` will result in a resource group name for Azure TRE instance of `rg-tre-dev-42`. This must be less than 12 characters. Allowed characters: lowercase alphanumerics.
`MGMT_RESOURCE_GROUP_NAME`	The name of the shared resource group for all Azure TRE core resources.
`MGMT_STORAGE_ACCOUNT_NAME`	The name of the storage account to hold the Terraform state and other deployment artifacts. E.g. `mystorageaccount`.
`ACR_NAME`	A globally unique name for the Azure Container Registry (ACR) that will be created to store deployment images.

Configure Core Variables

Configure the following variables in your github environment:

Variable name	Description
`LOCATION`	The Azure location (region) for all resources. E.g. `westeurope`
`TERRAFORM_STATE_CONTAINER_NAME`	Optional. The name of the blob container to hold the Terraform state. Default value is `tfstate`.
`CORE_ADDRESS_SPACE`	Optional. The address space for the Azure TRE core virtual network. Default value is `10.0.0.0/22`.
`TRE_ADDRESS_SPACE`	Optional. The address space for the whole TRE environment virtual network where workspaces networks will be created (can include the core network as well). Default value is `10.0.0.0/16`
`AZURE_ENVIRONMENT`	Optional. The name of the Azure environment. Supported values are `AzureCloud` and `AzureUSGovernment`. Default value is `AzureCloud`.
`CORE_APP_SERVICE_PLAN_SKU`	Optional. The SKU used for AppService plan for core infrastructure. Default value is `P1v2`.
`WORKSPACE_APP_SERVICE_PLAN_SKU`	Optional. The SKU used for AppService plan used in E2E tests. Default value is `P1v2`.
`RESOURCE_PROCESSOR_NUMBER_PROCESSES_PER_INSTANCE`	Optional. The number of processes to instantiate when the Resource Processor starts. Equates to the number of parallel deployment operations possible in your TRE. Defaults to `5`.
`ENABLE_SWAGGER`	Optional. Determines whether the Swagger interface for the API will be available. Default value is `false`.

Configure Authentication Secrets

In a previous Setup Auth configuration step authentication configuration was added in config.yaml file. Go to this file and add those env vars to your github environment:

Secret Name	Description
`AAD_TENANT_ID`	Tenant id against which auth is performed.
`APPLICATION_ADMIN_CLIENT_ID`	This client will administer AAD Applications for TRE
`APPLICATION_ADMIN_CLIENT_SECRET`	This client will administer AAD Applications for TRE
`TEST_ACCOUNT_CLIENT_ID`	This will be created by default, but can be disabled by editing `/devops/scripts/create_aad_assets.sh`. This is the user that will run the tests for you
`TEST_ACCOUNT_CLIENT_SECRET`	This will be created by default, but can be disabled by editing `/devops/scripts/create_aad_assets.sh`. This is the user that will run the tests for you
`API_CLIENT_ID`	API application (client) ID.
`API_CLIENT_SECRET`	API application client secret.
`SWAGGER_UI_CLIENT_ID`	Swagger (OpenAPI) UI application (client) ID.
`TEST_WORKSPACE_APP_ID`	Each workspace is secured behind it's own AD Application. Use the value of `WORKSPACE_API_CLIENT_ID` created in the `/config.yaml` env file
`TEST_WORKSPACE_APP_SECRET`	Each workspace is secured behind it's own AD Application. This is the secret for that application. Use the value of `WORKSPACE_API_CLIENT_SECRET` created in the `/config.yaml` env file

Create a Teams Webhook for deployment notifications

The deploy_tre.yml workflow sends a notification to a Microsoft Teams channel when it finishes running.

Note

If you don't want to notify a channel, you can also remove the Notify dedicated teams channel steps in the workflow

Follow the Microsoft Docs to create a webhook for your channel
Configure the MS_TEAMS_WEBHOOK_URI repository secret

Secret name
Description

MS_TEAMS_WEBHOOK_URI URI for the Teams channel webhook

Info

See Environment variables for full details of the deployment related variables.

Setup Github env in workflow

In your repository you will find that the pipelines under the folder .github/workflows on top of each workflow there is the workflow inputs part where the used Github environment name is set, make sure to update it with yours, for example:

Setup env in pipeline

Deploy the TRE using the workflow

With all the repository secrets set, you can trigger a workflow run by pushing to develop/main of your repo, or by dispatching the workflow manually.

Next steps

Deploying Azure TRE in Pipelines